pip install numpy fails (python 2.7 on Artik 710 board (Fedora)) -


i'm installing numpy through pip on samsung artik 710 (fedora , python 2.7). pip version 9.0.1.

i have inputted following:

pip install numpy  

however following error message:

collecting numpy   using cached numpy-1.12.1.zip installing collected packages: numpy   running setup.py install numpy ... error     complete output command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-xyasfu/numpy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-shmawz-record/install-record.txt --single-version-externally-managed --compile:     running numpy source directory.      note: if need reliable uninstall behavior, install     pip instead of using `setup.py install`:        - `pip install .`       (from git repo or downloaded source                                release)       - `pip install numpy`   (last numpy release on pypi)       blas_opt_info:     blas_mkl_info:       libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/']       not available      blis_info:       libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/']       not available      openblas_info:       libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/']       not available      atlas_3_10_blas_threads_info:     setting ptatlas=atlas       libraries tatlas not found in ['/usr/local/lib', '/usr/lib/sse2', '/usr/lib', '/usr/lib/sse2', '/usr/lib/']       not available      atlas_3_10_blas_info:       libraries satlas not found in ['/usr/local/lib', '/usr/lib/sse2', '/usr/lib', '/usr/lib/sse2', '/usr/lib/']       not available      atlas_blas_threads_info:     setting ptatlas=atlas       libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib/sse2', '/usr/lib', '/usr/lib/sse2', '/usr/lib/']       not available      atlas_blas_info:       libraries f77blas,cblas,atlas not found in ['/usr/local/lib', '/usr/lib/sse2', '/usr/lib', '/usr/lib/sse2', '/usr/lib/']       not available      /tmp/pip-build-xyasfu/numpy/numpy/distutils/system_info.py:572: userwarning:         atlas (http://math-atlas.sourceforge.net/) libraries not found.         directories search libraries can specified in         numpy/distutils/site.cfg file (section [atlas]) or setting         atlas environment variable.       self.calc_info()     blas_info:       libraries blas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/']       not available      /tmp/pip-build-xyasfu/numpy/numpy/distutils/system_info.py:572: userwarning:         blas (http://www.netlib.org/blas/) libraries not found.         directories search libraries can specified in         numpy/distutils/site.cfg file (section [blas]) or setting         blas environment variable.       self.calc_info()     blas_src_info:       not available      /tmp/pip-build-xyasfu/numpy/numpy/distutils/system_info.py:572: userwarning:         blas (http://www.netlib.org/blas/) sources not found.         directories search sources can specified in         numpy/distutils/site.cfg file (section [blas_src]) or setting         blas_src environment variable.       self.calc_info()       not available      /bin/sh: svnversion: command not found     non-existing path in 'numpy/distutils': 'site.cfg'     /bin/sh: svnversion: command not found     f2py version 2     lapack_opt_info:     lapack_mkl_info:       libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/']       not available      openblas_lapack_info:       libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/']       not available      atlas_3_10_threads_info:     setting ptatlas=atlas       libraries tatlas,tatlas not found in /usr/local/lib       libraries lapack_atlas not found in /usr/local/lib       libraries tatlas,tatlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries tatlas,tatlas not found in /usr/lib       libraries lapack_atlas not found in /usr/lib       libraries tatlas,tatlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries tatlas,tatlas not found in /usr/lib/       libraries lapack_atlas not found in /usr/lib/     <class 'numpy.distutils.system_info.atlas_3_10_threads_info'>       not available      atlas_3_10_info:       libraries satlas,satlas not found in /usr/local/lib       libraries lapack_atlas not found in /usr/local/lib       libraries satlas,satlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries satlas,satlas not found in /usr/lib       libraries lapack_atlas not found in /usr/lib       libraries satlas,satlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries satlas,satlas not found in /usr/lib/       libraries lapack_atlas not found in /usr/lib/     <class 'numpy.distutils.system_info.atlas_3_10_info'>       not available      atlas_threads_info:     setting ptatlas=atlas       libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib       libraries lapack_atlas not found in /usr/local/lib       libraries ptf77blas,ptcblas,atlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries ptf77blas,ptcblas,atlas not found in /usr/lib       libraries lapack_atlas not found in /usr/lib       libraries ptf77blas,ptcblas,atlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries ptf77blas,ptcblas,atlas not found in /usr/lib/       libraries lapack_atlas not found in /usr/lib/     <class 'numpy.distutils.system_info.atlas_threads_info'>       not available      atlas_info:       libraries f77blas,cblas,atlas not found in /usr/local/lib       libraries lapack_atlas not found in /usr/local/lib       libraries f77blas,cblas,atlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries f77blas,cblas,atlas not found in /usr/lib       libraries lapack_atlas not found in /usr/lib       libraries f77blas,cblas,atlas not found in /usr/lib/sse2       libraries lapack_atlas not found in /usr/lib/sse2       libraries f77blas,cblas,atlas not found in /usr/lib/       libraries lapack_atlas not found in /usr/lib/     <class 'numpy.distutils.system_info.atlas_info'>       not available      lapack_info:       libraries lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/']       not available      /tmp/pip-build-xyasfu/numpy/numpy/distutils/system_info.py:572: userwarning:         lapack (http://www.netlib.org/lapack/) libraries not found.         directories search libraries can specified in         numpy/distutils/site.cfg file (section [lapack]) or setting         lapack environment variable.       self.calc_info()     lapack_src_info:       not available      /tmp/pip-build-xyasfu/numpy/numpy/distutils/system_info.py:572: userwarning:         lapack (http://www.netlib.org/lapack/) sources not found.         directories search sources can specified in         numpy/distutils/site.cfg file (section [lapack_src]) or setting         lapack_src environment variable.       self.calc_info()       not available      /usr/lib/python2.7/distutils/dist.py:267: userwarning: unknown distribution option: 'define_macros'       warnings.warn(msg)     running install     running build     running config_cc     unifing config_cc, config, build_clib, build_ext, build commands --compiler options     running config_fc     unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options     running build_src     build_src     building py_modules sources     creating build     creating build/src.linux-armv7l-2.7     creating build/src.linux-armv7l-2.7/numpy     creating build/src.linux-armv7l-2.7/numpy/distutils     building library "npymath" sources     customize gnu95fcompiler     not locate executable gfortran     not locate executable f95     customize intelfcompiler     not locate executable ifort     not locate executable ifc     customize laheyfcompiler     not locate executable lf95     customize pgroupfcompiler     not locate executable pgfortran     customize absoftfcompiler     not locate executable f90     not locate executable f77     customize nagfcompiler     customize vastfcompiler     customize compaqfcompiler     not locate executable fort     customize intelitaniumfcompiler     not locate executable efort     not locate executable efc     customize intelem64tfcompiler     customize gnufcompiler     not locate executable g77     customize g95fcompiler     not locate executable g95     customize pathscalefcompiler     not locate executable pathf95     don't know how compile fortran code on platform 'posix'     c compiler: gcc -pthread -fno-strict-aliasing -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -dndebug -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -fpic      compile options: '-inumpy/core/src/private -inumpy/core/src -inumpy/core -inumpy/core/src/npymath -inumpy/core/src/multiarray -inumpy/core/src/umath -inumpy/core/src/npysort -i/usr/include/python2.7 -c'     gcc: _configtest.c     gcc -pthread _configtest.o -o _configtest     success!     removing: _configtest.c _configtest.o _configtest     c compiler: gcc -pthread -fno-strict-aliasing -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -dndebug -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -fpic      compile options: '-inumpy/core/src/private -inumpy/core/src -inumpy/core -inumpy/core/src/npymath -inumpy/core/src/multiarray -inumpy/core/src/umath -inumpy/core/src/npysort -i/usr/include/python2.7 -c'     gcc: _configtest.c     _configtest.c:1:5: warning: conflicting types built-in function ‘exp’      int exp (void);          ^~~     gcc -pthread _configtest.o -o _configtest     _configtest.o: in function `main':     /tmp/pip-build-xyasfu/numpy/_configtest.c:6: undefined reference `exp'     collect2: error: ld returned 1 exit status     _configtest.o: in function `main':     /tmp/pip-build-xyasfu/numpy/_configtest.c:6: undefined reference `exp'     collect2: error: ld returned 1 exit status     failure.     removing: _configtest.c _configtest.o     c compiler: gcc -pthread -fno-strict-aliasing -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -dndebug -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -fpic      compile options: '-inumpy/core/src/private -inumpy/core/src -inumpy/core -inumpy/core/src/npymath -inumpy/core/src/multiarray -inumpy/core/src/umath -inumpy/core/src/npysort -i/usr/include/python2.7 -c'     gcc: _configtest.c     _configtest.c:1:5: warning: conflicting types built-in function ‘exp’      int exp (void);          ^~~     gcc -pthread _configtest.o -lm -o _configtest     success!     removing: _configtest.c _configtest.o _configtest     creating build/src.linux-armv7l-2.7/numpy/core     creating build/src.linux-armv7l-2.7/numpy/core/src     creating build/src.linux-armv7l-2.7/numpy/core/src/npymath     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npymath/npy_math.c     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npymath/ieee754.c     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npymath/npy_math_complex.c     building library "npysort" sources     creating build/src.linux-armv7l-2.7/numpy/core/src/npysort     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npysort/quicksort.c     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npysort/mergesort.c     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npysort/heapsort.c     creating build/src.linux-armv7l-2.7/numpy/core/src/private     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/private/npy_partition.h       adding 'build/src.linux-armv7l-2.7/numpy/core/src/private' include_dirs.     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npysort/selection.c     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/private/npy_binsearch.h     conv_template:> build/src.linux-armv7l-2.7/numpy/core/src/npysort/binsearch.c     none - nothing done h_files = ['build/src.linux-armv7l-2.7/numpy/core/src/private/npy_partition.h', 'build/src.linux-armv7l-2.7/numpy/core/src/private/npy_binsearch.h']     building extension "numpy.core._dummy" sources     generating build/src.linux-armv7l-2.7/numpy/core/include/numpy/config.h     c compiler: gcc -pthread -fno-strict-aliasing -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -dndebug -o2 -g -pipe -wall -werror=format-security -wp,-d_fortify_source=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -d_gnu_source -fpic -fwrapv -fpic      compile options: '-inumpy/core/src/private -inumpy/core/src -inumpy/core -inumpy/core/src/npymath -inumpy/core/src/multiarray -inumpy/core/src/umath -inumpy/core/src/npysort -i/usr/include/python2.7 -c'     gcc: _configtest.c     _configtest.c:1:20: fatal error: python.h: no such file or directory      #include <python.h>                         ^     compilation terminated.     _configtest.c:1:20: fatal error: python.h: no such file or directory      #include <python.h>                         ^     compilation terminated.     failure.     removing: _configtest.c _configtest.o     traceback (most recent call last):       file "<string>", line 1, in <module>       file "/tmp/pip-build-xyasfu/numpy/setup.py", line 391, in <module>         setup_package()       file "/tmp/pip-build-xyasfu/numpy/setup.py", line 383, in setup_package         setup(**metadata)       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/core.py", line 169, in setup         return old_setup(**new_attr)       file "/usr/lib/python2.7/distutils/core.py", line 151, in setup         dist.run_commands()       file "/usr/lib/python2.7/distutils/dist.py", line 953, in run_commands         self.run_command(cmd)       file "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command         cmd_obj.run()       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/command/install.py", line 62, in run         r = self.setuptools_run()       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/command/install.py", line 36, in setuptools_run         return distutils_install.run(self)       file "/usr/lib/python2.7/distutils/command/install.py", line 563, in run         self.run_command('build')       file "/usr/lib/python2.7/distutils/cmd.py", line 326, in run_command         self.distribution.run_command(command)       file "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command         cmd_obj.run()       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/command/build.py", line 47, in run         old_build.run(self)       file "/usr/lib/python2.7/distutils/command/build.py", line 127, in run         self.run_command(cmd_name)       file "/usr/lib/python2.7/distutils/cmd.py", line 326, in run_command         self.distribution.run_command(command)       file "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command         cmd_obj.run()       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/command/build_src.py", line 148, in run         self.build_sources()       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/command/build_src.py", line 165, in build_sources         self.build_extension_sources(ext)       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/command/build_src.py", line 324, in build_extension_sources         sources = self.generate_sources(sources, ext)       file "/tmp/pip-build-xyasfu/numpy/numpy/distutils/command/build_src.py", line 377, in generate_sources         source = func(extension, build_dir)       file "numpy/core/setup.py", line 416, in generate_config_h         moredefs, ignored = cocache.check_types(config_cmd, ext, build_dir)       file "numpy/core/setup.py", line 40, in check_types         out = check_types(*a, **kw)       file "numpy/core/setup.py", line 275, in check_types         "install {0}-dev|{0}-devel.".format(python))     systemerror: cannot compile 'python.h'. perhaps need install python-dev|python-devel.      ---------------------------------------- command "/usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-xyasfu/numpy/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-shmawz-record/install-record.txt --single-version-externally-managed --compile" failed error code 1 in /tmp/pip-build-xyasfu/numpy/ 

please me. thank you.

it looks you're missing python-devel package in operating system - required python packages use compiled c code performance, numpy.

try running yum install python-devel - if works, retry pip install numpy.


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